BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C05LP1|AL428691
(934 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1680 1838 0.0
>3x_Contig1680
Length = 12597
Score = 1838 bits (927), Expect = 0.0
Identities = 934/935 (99%), Gaps = 1/935 (0%)
Strand = Plus / Minus
Query: 1 gatccacatgtctctaatacttgtaaattagaaagatagaacagttagaagagaagtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6558 gatccacatgtctctaatacttgtaaattagaaagatagaacagttagaagagaagtgtg 6499
Query: 61 cggatgacggctggaactgatgcacatgctcgaataattttaaaaatggtgcgaggacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6498 cggatgacggctggaactgatgcacatgctcgaataattttaaaaatggtgcgaggacag 6439
Query: 121 aataaagataatgaagaagaataaggaggggaagaagggaaagaagtagaaggagaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6438 aataaagataatgaagaagaataaggaggggaagaagggaaagaagtagaaggagaaaga 6379
Query: 181 acggaaatctaacagtacgttatgttttgttttttgttcaatatagcttcaaacttacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6378 acggaaatctaacagtacgttatgttttgttttttgttcaatatagcttcaaacttacaa 6319
Query: 241 cttcaaagcctttggcttttcccatgggtattcttggttagtgaagtgaccgtagaagcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6318 cttcaaagcctttggcttttcccatgggtattcttggttagtgaagtgaccgtagaagcg 6259
Query: 301 gttggcaagtagattggtctagccaaatctaattccttcacaaggacaccaggtctcaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6258 gttggcaagtagattggtctagccaaatctaattccttcacaaggacaccaggtctcaag 6199
Query: 361 tcgaagttcttcttgatgatttcaataacttcttcatctgggatggtagcggtaccatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6198 tcgaagttcttcttgatgatttcaataacttcttcatctgggatggtagcggtaccatag 6139
Query: 421 gtgtcgacatgcaaggataaaggttcagcgataccgatagcgtaagagaattggacttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6138 gtgtcgacatgcaaggataaaggttcagcgataccgatagcgtaagagaattggacttga 6079
Query: 481 actctcttacagataccagcgtggaccaaagacttagcaacccatctagcggcgtaa-ca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 6078 actctcttacagataccagcgtggaccaaagacttagcaacccatctagcggcgtaagca 6019
Query: 540 gcggaacggtcgaccttggagtaatccttaccggagaaagcaccaccaccgacagcagaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6018 gcggaacggtcgaccttggagtaatccttaccggagaaagcaccaccaccgacagcagaa 5959
Query: 600 gcaccaccgtaagcatcgacgataatctttctaccagtcaaaccggcatcaccttgagga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5958 gcaccaccgtaagcatcgacgataatctttctaccagtcaaaccggcatcaccttgagga 5899
Query: 660 ccaccgataacgaatctaccagatggttggatgtagtacttggtgttttcatccaacatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5898 ccaccgataacgaatctaccagatggttggatgtagtacttggtgttttcatccaacatc 5839
Query: 720 tcggctggacaaaccttgtcgatgatgttagttcttagagattgacgcaaatcagcagtg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5838 tcggctggacaaaccttgtcgatgatgttagttcttagagattgacgcaaatcagcagtg 5779
Query: 780 ctgatttcttcggcgtgttgagcagagataacgatggtgtcgattctcaatgggatccat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5778 ctgatttcttcggcgtgttgagcagagataacgatggtgtcgattctcaatgggatccat 5719
Query: 840 ctaccattatcttccttgtattcaacggtaacttgagtcttggtatcaggtctaacccat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5718 ctaccattatcttccttgtattcaacggtaacttgagtcttggtatcaggtctaacccat 5659
Query: 900 ggcaaagaaccgtctcttctggcatcagccatagc 934
|||||||||||||||||||||||||||||||||||
Sbjct: 5658 ggcaaagaaccgtctcttctggcatcagccatagc 5624
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7121
Number of Sequences: 1807
Number of extensions: 7121
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)